Add various packages and patches for build system improvements

- Introduced valgrind with a patch to respect flags and updated its configuration.
- Added Vulkan ICD loader with CMake build configuration.
- Implemented Waf build system with a custom build script and configuration.
- Included Wayland protocols with Meson build system.
- Added xcb-util-keysyms with autotools configuration.
- Introduced Yasm with multiple patches for compatibility and improvements.
- Added Yelp tools and XSL with Meson build configurations and necessary patches for POSIX compliance.

extra/doxygen/0001-test-009-bug.patch

@@ -0,0 +1,14 @@
+diff --git a/testing/009/bug.xml b/testing/009/bug.xml
+index e7aff1d..a8200ff 100644
+--- a/testing/009/bug.xml
++++ b/testing/009/bug.xml
+@@ -18,7 +18,8 @@
+             <term>Member <ref refid="class_bug_1a1f720954dd97cd1203e80501a6eae74c" kindref="member">Bug::foo</ref>  ()</term>
+           </varlistentry>
+           <listitem>
+-            <para><anchor id="bug_1_bug000002"/>Function bug<itemizedlist><listitem><para>list item 1 in bug</para></listitem><listitem><para>list item 2 in bug</para></listitem></itemizedlist></para>
++            <para><anchor id="bug_1_bug000002"/>Function bug<itemizedlist><listitem><para>list item 1 in bug</para></listitem><listitem><para>list item 2 in bug</para></listitem></itemizedlist>
++</para>
+           </listitem>
+         </variablelist>
+       </para>

extra/doxygen/doxygen.toml

@@ -0,0 +1,50 @@
+[build]
+type = "cmake"
+
+[build.flags]
+build_dir = "build"
+configure = [
+    "-W no-dev",
+    "-Duse_sys_spdlog:BOOL=ON",
+    "-Duse_sys_sqlite3:BOOL=ON",
+    "-Duse_sys_fmt:BOOL=ON",
+    "-Duse_libclang:BOOL=ON",
+    "-Dbuild_doc:BOOL=OFF",
+    "-G Ninja",
+]
+skip_tests = true
+
+[dependencies]
+build = [
+    "cmake",
+    "clang",
+    "flex",
+    "python",
+    "ninja"
+]
+runtime = [
+    "clang",
+    "fmt",
+    "glibc",
+    "libunwind",
+    "libcxx",
+    "llvm-libs",
+    "spdlog",
+    "sqlite",
+]
+
+[[manual_sources]]
+file = "0001-test-009-bug.patch"
+
+[package]
+description = "Documentation system for C++, C, Java, IDL and PHP"
+homepage = "http://www.doxygen.nl/"
+license = "GPL-2.0-or-later"
+name = "doxygen"
+version = "1.16.1"
+
+[[source]]
+extract_dir = "$name-$version"
+patches = ["0001-test-009-bug.patch"]
+sha256 = "201ce33b514ea87cc1697c0dcf829692c2695c1812683a9cc622194b05e263a8"
+url = "https://www.doxygen.nl/files/doxygen-$version.src.tar.gz"